2019-12-18
REL
PDBe
PDBe
PDBe
2018-10-09
2019-01-09
2019-01-09
2019-12-18
German Research Foundation
FOR2092
Germany
Max Planck Society
Germany
German Research Foundation
NO 836/1-1
Germany
German Federal Ministry for Education and Research
RESOLV
Germany
Japan Science and Technology
JPMJCR13M4
Japan
Structure of the photosynthetic complex I from Thermosynechococcus elongatus
Schuller JM
Schuller SK
Kurisu G
Engel BD
Nowaczyk MM
Schuller JM
Birrell JA
Tanaka H
Konuma T
Wulfhorst H
Cox N
Schuller SK
Thiemann J
Lubitz W
Setif P
Ikegami T
Engel BD
Kurisu G
Nowaczyk MM
Structural adaptations of photosynthetic complex I enable ferredoxin-dependent electron transfer.
Science
US
363
257
260
2019
30573545
doi:10.1126/science.aau3613
1095-9203
0038
SCIEAS
EMD-0281
associated EM volume
Structure of the photosynthetic complex I from Thermosynechococcus elongatus
6hum
FULLOVERLAP
photosynthetic complex I
photosynthetic complex I
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1
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5
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8
9
10
11
12
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14
15
16
17
18
Thermosynechococcus elongatus (strain BP-1)
NAD(P)H-quinone oxidoreductase subunit 1
Thermosynechococcus elongatus BP-1
0.040565984
1
LEVO
MESGIDLQGQFISALQSLGLSHDLAKLLWLPLPMLMMLIVATVGVLVAVWLERKISAAVQQRIGPEYIGPLGILAPLADG
LKLIFKEDVLPANSDRWLFTLGPAVVVIPVFLSYIIVPFGQNLLISNLAMGVFLWIALSSIAPIGLLMAGYASNNKYSLL
GGLRAAAQSISYEIPLALAVLAVAMMSNGLGTVEIVEQQSQYGILSWNVWRQPIGFLVFWIAALAECERLPFDLPEAEEE
LVAGYQTEYAGMKFALFYLGAYVNLVLSALLVSVLYFGGWSFPIPLETIANLLGVSETNPFLQIAFAVLGITMTLIKAYF
FVFLAILLRWTVPRVRIDQLLDLGWKFLLPVGLVNLLLTAGLKLAFPVAFGG
1.6.5.-
NAD(P)H-quinone oxidoreductase subunit 3
Thermosynechococcus elongatus BP-1
0.015013919
1
LEVO
MVAIPRLRDTATVFVLSGYEYFLGFLIICSLVPVLALAASALLRPKSGRMIRLTTYESGMEPIGGAWIQFNVRYYMFALV
FVIFDVETVFLYPWAVAFHQLGLLAFIEALIFIAILVVALVYAWRKRALEWS
1.6.5.-
NAD(P)H-quinone oxidoreductase chain 4 1
Thermosynechococcus elongatus BP-1
0.057847504
1
LEVO
MSTFPWLTTIILFPIVAALAIPFIPDPTGKGRPIRWYALAVGLIDFALIVYAFTNFYDLNTPGMQLWESYDWIPEIGLRW
SVGADGLSMPLILLTGFITTLAILAAWPVTLKPRLFYFLMLAMYGGQIAVFAVQDMLVFFLAWELELIPVYLLLAIWGGH
KRQYAATKFILYTAGSSLFILVAGLAMAFYGDTVSFDMQTLAAKDYALGFQLLVYAGFLVAYGVKLPIVPLHTWLPDAHG
EATAPVHMLLAGILLKMGGYALIRMNVDMLPAAHAKFAPVLVILGVVNIIYAALTSYAQRNLKRKIAYSSISHIGFVLIG
IASFTNLGMSGAVLQMVSHGLIGASLFFLVGATYDRTHTLILEEMGGVGQKMKKIFAMFTACSLASLALPGMSGFVAELM
VFIGFATSDAYSLPFRVIVVFLAAVGVILTPIYLLSMLREIFYGPENKELVEHEALVDAEPREVFIIACLLVPIIGIGLY
PKLLTQIYDATTGQVIARAREVLPTLAQQTEQPLGILPMVAPQLKANAQ
1.6.5.-
NAD(P)H-quinone oxidoreductase subunit 4L
Thermosynechococcus elongatus BP-1
0.011140265
1
LEVO
MQLTYVLILAALLFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLIGFANYLDGQQIKGQVFAVFVITVAAAEAAVGLAI
ILAIYRNRDTVDMEKFNLLKW
1.6.5.-
NAD(P)H-quinone oxidoreductase subunit 2
Thermosynechococcus elongatus BP-1
0.055168543
1
LEVO
MDLVTLAGQLNAGTILPETILIVTLLVVLLADLIQGRQADRWTPYFAIVGLGGAIATMIPLWTQPATISFFGSFISDHLS
LFFRGLIALSALGTILMSIRYVEQTGSSLGEFMTILLTATVGGMFIAGAQELVFIFVALETLSIASYLLTGYTKRDSRSN
EAALKYLLIGAASSAIFLYGSSLLYGLSGGHTQLPAIAQALSSESLGLVVALVFVIAGISFKISAVPFHQWTPDVYEGAP
TPVVAFLSVGSKAAGFALAIRFLTLAFPSVTDQWQLIFTVLAILSMILGNVVALAQTSMKRMLAYSSIGQAGFVMIGFVV
GTEAGYASMLFYLLVYLFMNLGAFTCVILFSLRTGTDQISEYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFW
AGWQAGAYGLVLLGLLTSVISIYYYIRVVKMMVVKEPQEMSEAVRNYPEVSWSSFGLRPLQVGLVMTVIATSLAGILANP
LFNLVNTAVWDVPQLANQPTVMEVAYQALSPAGKS
1.6.5.-
NADH dehydrogenase subunit 6
Thermosynechococcus elongatus BP-1
0.021580568
1
LEVO
MDLATLTQTITFFALAAAVIIAALGVVLLDNVVYSAFLLGGVFLSIAGLYILMNADFVSAAQILIYVGAVNVLILFAIML
VNKRETYTPVPGRWLRQGGAAVVSLGVFALLTKMILQTPWQLSSVPPTPDSITTIGQHFFSDFLLPFELASVLLLMALIG
AVVLARRELVLEPEPILGEEVVPPLELPERPREPVALSEK
NAD(P)H-quinone oxidoreductase subunit J
Thermosynechococcus elongatus BP-1
0.019363789
1
LEVO
MSDTPEAPIVEAGPVGRLLQSQNLSVESLGRDASGVEMIKVDRDRLLAVCQTLYADGFNYLRCQAAYDSGPGQDLVSTYH
LIKLSDNADRPPEVRIKVFVPRDDPRVPSVYWIWKTADWQERESYDMFGIVYEGHPNLKRILMPEDWVGWPLRKDYITPD
FYELQEAY
1.6.5.-
Proton-translocating NADH-quinone dehydrogenase subunit P NdhP
Thermosynechococcus elongatus BP-1
0.004630392
1
LEVO
AVISVKPILLAMTPVFILLCLFFGTRNGFYDTDQYHGNAAAH
NAD(P)H-quinone oxidoreductase subunit H
Thermosynechococcus elongatus BP-1
0.045271184
1
LEVO
MPKIETRTEPMVINMGPHHPSMHGVLRLMVTLDGEDVIDCEPVIGYLHRGMEKIAENRTNIMFIPYVSRWDYAAGMFNEA
VTVNAPEKLAGIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREYIYDLFEAATGMRFINNNYFR
IGGVAADLTYGWVTKCRDFCDYFLPKVDEYERLITNNPIFVRRLQGVGKISREEAINWGLSGPMLRASGVKWDLRKVDHY
ECYDDFDWDVPVATEGDCLARYIVRIQEMRESVKIIRQALDGLPGGPYENLEAKRMLEGAKSEWNGFDYQYIGKKLSPTF
KIPKGEHYVRVESGKGELGIYLIGDDNVFPWRWKIRPPDFNNLQVLPQLLKGMKVADIVAILGSIDVIMGSVDR
1.6.5.-
NAD(P)H-quinone oxidoreductase subunit I
Thermosynechococcus elongatus BP-1
0.022444801
1
LEVO
MKFLNQITNYAKEAVQSAKYIGQGLSVTFDHMRRRPITVQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPINLPVV
DWVFNKELKKKELKHYSIDFGVCIFCANCVEYCPTNCLSVTEEYELATYDRHELNYDSVAMGRIPYKVTQDPMVTPIREF
AYLPAGVMSGHDLPAGAQRAGERPEAIANTAKSSEN
1.6.5.-
NAD(P)H-quinone oxidoreductase subunit K
Thermosynechococcus elongatus BP-1
0.025766998
1
LEVO
MTNTTSPAILNPIARPEVPQELAENIILTSLNDVYDWARLSSLWPLMYGTACCFIEFAAMIGSRFDFDRFGLVPRNSPRQ
ADLIITSGTITMKMAPALVRLYEQMPSPKYVIAMGACTITGGMFSSDSYSAVRGVDKLIPVDVYLPGCPPRPEAIMDAIV
KLRKKIANEHINERGNLAQTHRLFTAKHKMKPVPPILTGQYLNAPSRQAPPPALAAAMGIAVPALGEAVSETTSVAE
1.6.5.-
NAD(P)H-quinone oxidoreductase subunit L
Thermosynechococcus elongatus BP-1
0.008575137
1
LEVO
MAVSTELLVLGVYGALAGLYLLVVPAIVYAYLNARWYVASSFERAFMYFLVTFFFPGLLLLAPFINFRPQPRSLNS
1.6.5.-
NADH dehydrogenase subunit 5
Thermosynechococcus elongatus BP-1
0.072025352
1
LEVO
MEPLYQYAWLIPVLPLLGALIVGFGLIAFSETTSKLRRPSAIFIMALMAIAMGHSLTLFWSQVQGHLPYTQMIEWAAAGN
LHIAMGYVIDPLAALMLVIVTTVAFLVMLYSDGYMAHDPGYVRFFAYLSLFGSSMLGLVVSPNLVQVYIFWELVGMCSYL
LIGFWYDRKSAAEAAQKAFVTNRVGDFGLLLGMVGLFWATGTFDFAGMGDRLTELVNTGLLSPSLAAILAILVFLGPVAK
SAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLIARMFPVFEQLPQVMTTIAWTGAFTAFMGATIAITQNDIKKSLA
YSTISQLGYMVMGMGVGAYSAGLFHLMTHAYFKAMLFLGSGSVIHSMEGVVGHNPDLAQDMRYMGGLRKYMPITGATFLV
GCLAISGVPPFAGFWSKDEILGAVFHANPAMWLLTWLTAGLTAFYMFRMYFMTFEGKFRNVPPERQEHHDHHSHHAAVPH
ESPWTMTLPLVVLAIPSTLIGFVGTPFNNLFEVFIHAPGEEKVAEHAVDLTEFLILGGSSVGIGLMGITVAYLMYLKGTP
SPQAIAKAIQPLYQFSLHKWYFDELYEAVFIKGCRRLARQVLEVDYNVVDGVVNLTGFVTMVTGEGLKYLQNGRAQFYAL
IVLLAVLGFVIFSVQT
NAD(P)H-quinone oxidoreductase subunit N
Thermosynechococcus elongatus BP-1
0.016656182
1
LEVO
MGLLAGYQFVKDLESAGALALFVPPEGGFEGRYQRRLRSKGYTTLPMSAPGLGDLAAYLTQEHGIRPAHTGKEDIRVYFQ
PPLVTYHLENLPPNAKGLVLWLIDGKRLSKQEFAYLAQLTQTLPKFKVVVEVGGDRVVRWEPLADWVAAA
1.6.5.-
NAD(P)H-quinone oxidoreductase subunit M
Thermosynechococcus elongatus BP-1
0.012584056
1
LEVO
MLLKSTTRHVHIYAGHVVDGEVHPDTETLTLNVDPDNELEWNEAALAKVEAKFRELVANAAGEDLTEYNLRRIGSDLEHF
IRSLLMQGEIGYNLNSRVRNYSLGIPRVNHS
1.6.5.-
Tlr0636 protein
Thermosynechococcus elongatus BP-1
0.012462559
1
LEVO
MIRPIADTYPLLPLSKAQMGQRQEIINSHKRLWDKTMATDLIMTILPGMTVKVTNPNDTYYQFQGIVQRITDGKVAVLFE
GGNWDKLVTFQASELEPVVVTPKEKAKAKK
NAD(P)H-quinone oxidoreductase subunit O
Thermosynechococcus elongatus BP-1
0.007877076
1
LEVO
MAIKKGDLVKVVAEKLANSLEALASDHRYPPYLFEGRGEVVDIRGDYAQIKFPVPTPTVWLRLDQLEVAQ
1.6.5.-
Proton-translocating NADH-quinone dehydrogenase subunit Q NdhQ
Thermosynechococcus elongatus BP-1
0.004206993
1
LEVO
ATDFRAIMKFDGADSPAMIAISAVLILGFIAGLIWWALH
BETA-CAROTENE
0.000536873
1
BCR
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
0.000787158
1
LMG
IRON/SULFUR CLUSTER
0.00035164
3
SF4
singleParticle
particle
8
ETHANE-PROPANE
FEI TITAN KRIOS
FLOOD BEAM
BRIGHT FIELD
FIELD EMISSION GUN
300
GATAN K2 SUMMIT (4k x 4k)
49.93
1
3.34
FSC 0.143 CUT-OFF
133485
MAXIMUM LIKELIHOOD
PROJECTION MATCHING