2021-04-28
REL
PDBe
PDBe
PDBe
2020-10-25
2021-04-07
2021-04-07
2021-04-28
LolCDE in complex with AMP-PNP in the closed NBD state
Tang XD
Chang SH
Zhang K
Wang T
Luo QH
Qiao W
Wang C
Zhang ZB
Zhang ZY
Zhu XF
Dong CJ
Zhang X
Dong HH
Tang X
Chang S
Zhang K
Luo Q
Zhang Z
Wang T
Qiao W
Wang C
Shen C
Zhang Z
Zhu X
Wei X
Dong C
Zhang X
Dong H
Structural basis for bacterial lipoprotein relocation by the transporter LolCDE.
Nat.Struct.Mol.Biol.
US
28
347
355
2021
33782615
doi:10.1038/s41594-021-00573-x
1545-9985
EMD-11885
associated EM volume
LolCDE in complex with lipoprotein
7ark
FULLOVERLAP
LolCDE in complex with AMPPNP dimerized form
LolCDE in complex with AMPPNP dimerized form
0
1
2
3
Escherichia coli
K12
Escherichia coli
C43
pTRC99a
Lipoprotein-releasing ABC transporter permease subunit LolC
Escherichia coli (strain K12)
K12
0.043295516
1
Escherichia coli BL21(DE3)
LEVO
MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTVLSVMNGFERELQNNILGLMPQAILSSEHGSLNPQQL
PETAVKLDGVNRVAPITTGDVVLQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD
QIRVMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGYEMLVNIEDASRLMRYPAGNITGWRLWLDEPLKVDSLSQQKL
PEGSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVAVAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMVFMVQGAS
AGIIGAILGAALGALLASQLNNLMPIIGVLLDGAALPVAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQPAEALRYE
Lipoprotein-releasing system transmembrane protein LolE
Escherichia coli (strain K12)
K12
0.045385976999999994
1
Escherichia coli BL21(DE3)
LEVO
MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVGLSAMNGFERELNNRILAVVPHGEIEAVDQPWTNWQE
ALDHVQKVPGIAAAAPYINFTGLVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV
KQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMGSSVSGIALKMTDVFNANKLVRD
AGEVTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAMVLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFV
WYGLLAGLFGSLCGVIIGVVVSLQLTPIIEWIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSLLASWYPAR
RASNIDPARVLSGQ
Lipoprotein-releasing system ATP-binding protein LolD
Escherichia coli (strain K12)
K12
0.026576465
2
Escherichia coli BL21(DE3)
LEVO
MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAA
KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARAL
VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSLMGAEHHHHHHH
H
7.6.2.-
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
0.000506196
2
ANP
MAGNESIUM ION
2.4305e-05
2
MG
singleParticle
particle
4
7.8
20 mM Tris-HCl, pH 7.8, 150 mM NaCl and 0.05% LMNG
Quantifoil R1.2/1.3
COPPER
300
CARBON
HOLEY
GLOW DISCHARGE
ETHANE
95
FEI TITAN KRIOS
FLOOD BEAM
BRIGHT FIELD
FIELD EMISSION GUN
300
NITROGEN
VOLTA PHASE PLATE
GATAN K2 SUMMIT (4k x 4k)
SUPER-RESOLUTION
40.0
1
3108029
7ARH
C1
4.1
FSC 0.143 CUT-OFF
154025
ANGULAR RECONSTITUTION
MAXIMUM LIKELIHOOD
2
RELION
7ARH
C
7ARH
D
7ARH
E
7ARH
F