2024-03-20
REL
RCSB
RCSB
RCSB
2019-04-02
2019-05-08
2019-05-08
2024-03-20
Australian Research Council (ARC)
DP170104484
Australia
Australian Research Council (ARC)
DP160101018
Australia
Royal Society of New Zealand
14-UOA-146
New Zealand
Foundation for Science and Technology
C10X0804
New Zealand
Cryo-EM structure of YenTcA in its prepore state
Piper SJ
Brillault L
Membrane protein Pore-forming toxin Complex, TOXIN
Piper SJ
Brillault L
Rothnagel R
Croll TI
Box JK
Chassagnon I
Scherer S
Goldie KN
Jones SA
Schepers F
Hartley-Tassell L
Ve T
Busby JN
Dalziel JE
Lott JS
Hankamer B
Stahlberg H
Hurst MRH
Landsberg MJ
Cryo-EM structures of the pore-forming A subunit from the Yersinia entomophaga ABC toxin.
Nat Commun
UK
10
1952
1952
2019
31028251
doi:10.1038/s41467-019-09890-8
2041-1723
6ogd
FULLOVERLAP
Yersinia entomophaga toxin complex subunit A (YenTcA) in the pre-pore form
Yersinia entomophaga toxin complex subunit A (YenTcA) in the pre-pore form
0
1
2
3
Yersinia entomophaga
MH96
2.08
Toxin subunit YenA1
Yersinia entomophaga
0.12991232
5
LEVO
MDKYNNYSNVIKNKSSISPLLAAAAKIEPEITVLSSASKSNRSQYSQSLADTLLGLGYRSIFDIAKVSRQRFIKRHDESL
LGNGAVIFDKAVSMANQVLQKYRKNRLEKSNSPLVPQTSSSTDASSESQTNKLPEYNQLFPEPWDNFCRPGAIEALDSPA
SYLLDLYKFIQSVELDGSNQARKLETRRADIPKLSLDNDALYKEVTALSIVNDVLSGSAREYIDQSGQADKAVNQILGDT
HFPFTLPYSLPTQQINKGLGASNIELGTVIQRVDPQFSWNTTQEKYNQVLLAYTQLSSEQIALLSLPDVFTQNFLTQTEL
SAGYLSASTTEILAEKDLSRHGYIVKAADNIKGPTQLVEHSDASYDVIELTCTNQAKETITVKLRGENIITYQRTKARMV
PFDNSSPFSRQLKLTFVAEDNPSLGNLDKGPYFANMDIYAAEWVRENVSSETMVSRPFLTMTYRIAIAKAGASLEELQPE
ADAFFINNFGLSAEDSSQLVKLVAFGDQTGSKAEEIESLLSCGENLPIVSPNVIFANPIFGSYFNDEPFPAPYHFGGVYI
NAHQRNAMTIIRAEGGREIQSLSNFRLERLNRFIRLQRWLDLPSHQLDLLLTSVMQADADNSQQEITEPVLKSLGLFRHL
NLQYKITPEIFSSWLYQLTPFAVSGEIAFFDRIFNREQLFDQPFILDGGSFTYLDAKGSDAKSVKQLCAGLNISAVTFQF
IAPLVQSALGLEAGTLVRSFEVVSSLYRLVSIPQTFGLSTEDGLILMNILTDEMGYLAKQPAFDDKQTQDKDFLSIILKM
EALSAWLTKNNLTPASLALLLGVTRLAVVPTNNMVTFFKGIANGLSENVCLTTDDFQRQELEGADWWTLLSTNQVIDDMG
LVLDIHPVWGKSDEEMLMEKIQSIGVSNDNNTLSIIVQILIQAKNAQENLLSQTISAEYGVERSVVPLQLRWLGSNVYSV
LNQVLNNTPTDISSIVPKLSELTYSLLIYTQLINSLKLNKEFIFLRLTQPNWLGLTQPKLSTQLSLPEIYLITCYQDWVV
NANKNEDSIHEYLEFANIKKTEAEKTLVDNSEKCAELLAEILAWDAGEILKAASLLGLNPPQATNVFEIDWIRRLQTLSE
KTMISTEYLWQMGDLTENSEFSLKEGVGEAVMAALKAQGDSDNV
B6A877
Toxin subunit YenA2
Yersinia entomophaga
0.156324938
5
LEVO
MSNSIEAKLQEDLRDALVDYYLGQIVPNSKDFTNLRSTIKNVDDLYDHLLLDTQVSAKVITSRLSLVTQSVQQYINRIAL
NLEPGLSINQQEATDWEEFANRYGYWAANQQLRMFPEIYVDPTLRLTKTEFFFQLESALNQGKLTDDVAQKAVLGYLNNF
EEVSNLEIIAGYQDGIDIENDKTYFVARTRMQPYRYFWRSLDASQRNANSQELYPTAWSEWKAISVPLENVANGIVRPIM
MDNRLYISWFEVAEEKETDSDGNIIVSGRYRTKIRLAHLGFDGVWSSGTTLREEVLADQMEEMIAVVDRMEDEPRLALVA
FKEMSESWDVVFSYICDSMLIESSNLPTTTHPPKPGDGDKGLSDLDDYGANLVWFYLHETANGGKAEYKQLILYPVIINR
DWPIELDKTHQGDFGTVDDFTLNSNYTGDELSLYLQSSSTYKYDFSKSKNIIYGIWKEDANNNRCWLNYKLLTPEDYEPQ
INATLVMCDKGDVNIITGFSLPNGGVDAGGKIKVTLRVGKKLRDKFQIKQFSQTQYLQFPEASSADVWYIGKQIRLNTLF
AKELIGKASRSLDLVLSWETQNSRLEEAILGGAAELIDLDGANGIYFWELFFHMPFMVSWRFNVEQRYEDANRWVKYLFN
PFECEDEPALLLGKPPYWNSRPLVDEPFKGYSLTQPSDPDAIAASDPIHYRKAVFNFLTKNIIDQGDMEYRKLQPSARTL
ARLSYSTASSLLGRRPDVQLTSFWQPLTLEDASYKTDSEIRAIEMQSQPLTFEPVVHDQTMSAVDNDIFMYPMNNELRGL
WDRIENRIYNLRHNLTLDGKEINMDLYDSSISPRGLMKQRYQRVVTARNASKMNFKVPNYRFEPMLNRSKSGVETLIQFG
STLLSLLERKDSLSFDAYQMIQSGDLYRFSIDLQQQDIDINKASLEALQVSKQSAQDRYDHFKELYDENISSTEQKVIEL
QSQAANSLLMAQGMRTAAAALDVIPNIYGLAVGGSHWGAPLNAAAEIIMIKYQADSSKSESLSVSESYRRRRQEWELQYK
QAEWEVNSVEQQINLQNMQIKAANKRLEQVEAQQQQAMALLDYFSERFTNESLYTWLISQLSSLYLQAYDAVLSLCLSAE
ASLLYELNLGEQSFVGGGGWNDLYQGLMAGETLKLALMRMERVYVEQNSRRQEITKTISLKALLGESWPAELNKLKQKTP
INFNLEEQIFVEDYQELYQRRIKSVSVSLPMLVGPYEDVCAQLTQTSSSYSTRADLKTVENMLTKRTFADTPHLVRSIQP
NQQISLSTGVNDSGLFMLNFDDERFLPFEGSGVDSSWRLQFTNLKQNLDSLNDVILHVKYTAAIGSSTFSQGVRKILANI
NNDE
B6A878
Chitinase 2
Yersinia entomophaga
0.069740609
5
LEVO
MVNKYTYTSSKAMSDISDVIGEPLAAWDSQVGGRVFNVIFDGKVYTNTYWVERWQVPGIGSSDGNPHNAWKFVRAATADE
INKIGNPTTADVKPTENIPSPILVEDKYTEETYSRPDVNFKEDGSQGNLSYTATRVCAPMYNHYVGDKTKPKLSAYITDW
CQYDARLDGGGSKEEERGRGFDLATLMQNPATYDRLIFSFLGICGDIGNKSKKVQEVWDGWNAQAPSLGLPQIGKGHIVP
LDPYGDLGTARNVGLPPESADTSIESGTFLPYYQQNRAAGLLGGLRELQKKAHAMGHKLDLAFSIGGWSLSSYFSALAEN
PDERRVFVASVVDFFVRFPMFSCVDIDWEYPGGGGDEGNISSDKDGENYVLLIKELRSALDSRFGYSNRKEISIACSGVK
AKLKKSNIDQLVANGLDNIYLMSYDFFGTIWADYIGHHTNLYSPKDPGEQELFDLSAEAAIDYLHNELGIPMEKIHLGYA
NYGRSAVGGDLTTRQYTKNGPALGTMENGAPEFFDIVKNYMDAEHSLSMGKNGFVLMTDTNADADFLFSEAKGHFISLDT
PRTVKQKGEYAAKNKLGGVFSWSGDQDCGLLANAAREGLGYVADSNQETIDMGPLYNPGKEIYLKSISEIKSK
B6A879
3.2.1.14
singleParticle
particle
7.5
ETHANE
FEI TITAN KRIOS
FLOOD BEAM
BRIGHT FIELD
FIELD EMISSION GUN
300
GATAN K2 SUMMIT (4k x 4k)
80.0
1
19713
EMD-1978
C5
4.4
FSC 0.143 CUT-OFF
EMAN
2.2
9856
PROJECTION MATCHING
EMAN
2.2
PROJECTION MATCHING
EMAN
2.2