2024-03-20
REL
RCSB
RCSB
RCSB
2019-04-12
2019-10-02
2019-10-02
2024-03-20
National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)
R01 GM047795
United States
National Institutes of Health/National Human Genome Research Institute (NIH/NHGRI)
S10 OD019995
United States
Prohead 2 of the phage T5
Huet A
Duda RL
procapsid, HK97-fold, dsDNA-phage, icosahedral, VIRUS LIKE PARTICLE
Huet A
Duda RL
Boulanger P
Conway JF
Capsid expansion of bacteriophage T5 revealed by high resolution cryoelectron microscopy.
Proc.Natl.Acad.Sci.USA
US
116
21037
21046
2019
31578255
doi:10.1073/pnas.1909645116
1091-6490
0040
PNASA6
6okb
FULLOVERLAP
Escherichia phage T5
Escherichia phage T5
0
1
Escherichia phage T5
Escherichia coli
26
prohead 2
700.0
13
VIRUS-LIKE PARTICLE
OTHER
false
true
Major capsid protein
Escherichia phage T5
0.03293135899999999
13
LEVO
AVNQSSSVEVSSESYETIFSQRIIRDLQKELVVGALFEELPMSSKILTMLVEPDAGKATWVAASTYGTDTTTGEEVKGAL
KEIHFSTYKLAAKSFITDETEEDAIFSLLPLLRKRLIEAHAVSIEEAFMTGDGSGKPKGLLTLASEDSAKVVTEAKADGS
VLVTAKTISKLRRKLGRHGLKLSKLVLIVSMDAYYDLLEDEEWQDVAQVGNDSVKLQGQVGRIYGLPVVVSEYFPAKANS
AEFAVIVYKDNFVMPRQRAVTVERERQAGKQRDAYYVTQRVNLQRYFANGVVSGTYAAS
Q6QGD8
singleParticle
particle
2
7.6
100.0
NaCl
sodium chloride
10.0
Tris
1.0
MGCl2
magnesium chloride
1.0
CaCL2
calcium chloride
Quantifoil R2/1
COPPER
GLOW DISCHARGE
ETHANE-PROPANE
100
298
FEI VITROBOT MARK III
FEI TITAN KRIOS
SPOT SCAN
BRIGHT FIELD
FIELD EMISSION GUN
300
FEI TITAN KRIOS AUTOGRID HOLDER
NITROGEN
FEI FALCON II (4k x 4k)
INTEGRATING
1
3628
30.0
1
10154
RMC
I
BACK PROJECTION
6.7
FSC 0.143 CUT-OFF
Auto3DEM
8083
COMMON LINE
Auto3DEM
COMMON LINE
Auto3DEM
2FT1
PDB
experimental model
RIGID BODY FIT
REAL