2020-12-02RELPDBePDBePDBe2019-04-072019-04-172019-04-172020-12-02Cryo-EM structure of the anti-feeding prophage cap (AFP tube terminating cap)Desfosses ADesfosses AVenugopal HJoshi TFelix JJessop MJeong HHyun JHeymann JBHurst MRHGutsche IMitra AKAtomic structures of an entire contractile injection system in both the extended and contracted states.Nat MicrobiolUK418851894201931384001doi:10.1038/s41564-019-0530-62058-5276EMD-4783other EM volumeThis reconstruction is part of the composite map of full AFPEMD-4784associated EM volumeCryo-EM structure of the anti-feeding prophage cap (AFP tube terminating cap)6rapFULLOVERLAPCryo-EM structure of the anti-feeding prophage cap (AFP tube terminating cap)Cryo-EM structure of the anti-feeding prophage cap (AFP tube terminating cap)01234A scaling by a factor of 2 is recommended for visualisationSerratia entomophilaEscherichia coliAfp1Serratia entomophila0.0164494492Escherichia coliLEVOMAITADDIAVQYPIPTYRFIVTLGDEQVPFTSASGLDINFDTIEYRDGTGNWFKMPGQRQAPNITLSKGVFPGKNAMYEW
INAIQLNQVEKKDIMISLTNEAGTEVLVSWNVSNAFPTSLTSPSFDATSNEIAVQQITLMADRVTIQTAAfp2Serratia entomophila0.0387843551Escherichia coliLEVOMTVTTTYPGVYLSEDAVSSFSVNSAATAVPLFAYDSENTNTINKPIQVFRNWAEFTVEYPTPLEDAFYTSLSLWFMHGGG
KCYLVNEANIADAVAQYDDITLIVAAGTDTTTYTAFTTVVGQGYRIFGLFDGPKEKIAGTAKPDEVMEEYPTSPFGAVFY
PWGTLASGAAVPPSAIAAASITQTDRTRGVWKAPANQAVNGVTPAFAVSDDFQGKYNQGKALNMIRTFSGQGTVVWGART
LEDSDNWRYIPVRRLFNAVERDIQKSLNKLVFEPNSQPTWQRVKAAVDSYLHSLWQQGALAGNTPADAWFVQVGKDLTMT
QEEINQGKMIIKIGLAAVRPAEFIILQFSQDIAQAfp3Serratia entomophila0.0487775661Escherichia coliLEVOMATVTSVPGVYIEEDASPAMSVSASATAVPLFVARFTPLKPELAGVITRIGSWLDYTILFDSNVPSSARVTVSSTAVEPS
PEFDALETASSKATTTYTYQIDDTEVVDPTASVALRLYFQNGGGPCYLYPLEKADDNGPLAALPDLIDEVGEITLLASPD
PDETYRTAVYGALAASLDQHKGYFLLADSVNGDAPSAVGGSAQVAVYYPNVEVPHTRKLDDAEVAIDGYLDDEGKAVTTL
AALRVVNTEFAGEIAQSLSGDLSAPLSLPPSALIAGVYGKTDGERGVWKAPANVVLNGVSDVSVRVTNEQQAELNPKGIN
VIRHFSDRGLVVWGSRTQKDDDDWRYIPVRRLFDAAERDIKKALQPMVFEPNSQLTWKRVQTAIDNYLYRLWQQGALAGN
KAEEAYFVRVGKGITMTQDEINQGKMIIQVGMAAVRPAEFIILKFTQDMSQAfp16Serratia entomophila0.0322501841Escherichia coliLEVOMSMSNYQTLVDVNNAMNKMLRAYVNEAVAIRFDLPDVDATQADAAISVFLYDIHEDLQLRTAESRGFNAGAGRLLPGWVN
VKCNYLITYWESTGPATDADNPDSQPDNQAIQVMSQVLAALINNRQLADIPGAYTQVMPPKENLNSLGNFWQSLGNRPRL
SLNYCVTVPISLSDKGEEMTPVKSLSTTVEPKAPLSPLVITDALREQLRVALGGDYDACLAMTHVNLDSSPVANSDGSAA
EIRVSLRVYGMTPTEYLAPMNTVFNEWEKSEAAAVTPDGYRVYINAVDKTDLTGIsingleParticleparticle7ETHANEFEI TITAN KRIOSFLOOD BEAMBRIGHT FIELDFIELD EMISSION GUN300GATAN K2 SUMMIT (4k x 4k)20.0130858CTFFINDPrevious 20A map of AFP (Heymann et al., 2013)C63.3FSC 0.143 CUT-OFFRELION23797PROJECTION MATCHINGPROJECTION MATCHINGemd_4784_half_map_1.map.gz1IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
320
320320
0
00320320320432.0432.0432.090.090.090.0XYZ-0.0332372080.0757477660.000450812720.00504122441.351.351.35Noneemd_4784_half_map_2.map.gz1IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)