2024-03-13
REL
RCSB
RCSB
RCSB
2018-08-28
2018-09-12
2019-02-06
2024-03-13
National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)
ZIA ES103247
United States
Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7
Lo YH
Sobhany M
Hsu AL
Ford BL
Krahn JM
Borgnia MJ
Stanley RE
AAA-ATPase, RIBOSOMAL PROTEIN
Lo YH
Sobhany M
Hsu AL
Ford BL
Krahn JM
Borgnia MJ
Stanley RE
Cryo-EM structure of the essential ribosome assembly AAA-ATPase Rix7.
Nat Commun
UK
10
513
513
2019
30705282
doi:10.1038/s41467-019-08373-0
2041-1723
6mat
FULLOVERLAP
AAA-ATPase Rix7
AAA-ATPase Rix7
0
1
2
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
Rix7 mutant
Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719)
DSM 1495 / CBS 144.50 / IMI 039719
0.089418266
6
Escherichia coli
LEVO
MSRRPTLRLGLDRDVYNIVLNLEQQGTDENGKRPRLTVDYVYDTIKRSNSSLARQKKRMLEDSIERVLAVRKEQAKAEEE
TDSDDLIEAQERERERQKAAQAQRDANLLNRQIAKSWGFASSPGAKAADGEKGTDTGSIATPAPATPAVAENMAADTPTT
STGPVLPASSTDRQPNGEPRPKKRKAAPKEIDRTPPTKVSILDIAGVDDTLQRLLKEVWFPLRGGEACEKMGYRYDNGVL
LHGPSGCGKTTLAHAIAGSIGVAFIPVSAPSVIGGTSGESEKNIRDVFDEAIRLAPCLIFLDQIDAIAGRRESANKGMES
RIVAEIMNGMDRIRQNTPLGKNVVVLAATNRPEFLDPAIRRRFSVEIDMGMPSERAREQILRSLTRDLSLADDINFKELA
KMTPGYVGSDLQYVVKAAVSESFQANIDSLLAQARAKHPADHLANVSQPQRDWLLLEAHRDEEVSWPSTKITMEQFRKAV
SLVQPASKREGFSTIPDTTWSHVGALEDVRKKLEMSIIGPIKNPELFTRVGIKPAAGILLWGPPGCGKTLVAKAVANESK
ANFISIKGPELLNKYVGESERAVRQLFSRAKSSAPCILFFDQMDALVPRRDDSLSDASARVVNTLLTELDGVGDRSGIYV
IGATNRPDMIDEAIRRPGRLGTSIYVGLPSAEDRVKILKTLYRNTVKAPKKREGTNGEDVDMTDAAAEQQHQGTTDADLE
KVALDLRCTGFSGADLGNLMQAAAQACLERVYTQRQQKRKEGGSVAEEEEIEPVITMEDWEKALNEVKPSVKDPEKYMHS
GFAAALEHHHHHH
G0RZG1
unknown protein
Chaetomium thermophilum var. thermophilum DSM 1495
DSM 1495 / CBS 144.50 / IMI 039719
0.002315846
1
Escherichia coli
LEVO
(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)
(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)(UNK)
ADENOSINE-5'-TRIPHOSPHATE
0.000507181
11
ATP
singleParticle
particle
8.0
C-flat-1.2/1.3 4C
COPPER
ETHANE
FEI TITAN KRIOS
FLOOD BEAM
BRIGHT FIELD
FIELD EMISSION GUN
300
-1.2
-2.7
59000.0
FEI FALCON III (4k x 4k)
40.0
1
5FTK
C1
4.5
FSC 0.143 CUT-OFF
RELION
2.1.0
64386
NOT APPLICABLE
NOT APPLICABLE
5FTK
PDB
experimental model
5C18 was used for reference restraints in refinement